Difference between revisions of "Development Team/Datastore Rewrite"

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<noinclude>{{ GoogleTrans-en | es =show | bg =show | zh-CN =show | zh-TW =show | hr =show | cs =show | da =show | nl =show | fi =show | fr =show | de =show | el =show | hi =show | it =show | ja =show | ko =show | no =show | pl =show | pt =show | ro =show | ru =show | sv =show }}</noinclude>
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{{TOCright}}
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== Introduction ==
 +
 +
This page describes the design of a new DataStore implementation that was shipped first in the [[0.84]] (April 2009) Sugar release.
 +
 
== Goals ==
 
== Goals ==
  
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By examining the directory structure, we know where is localized the data related to each entry. We don't depend any more on a binary structure that could become corrupted and unusable as a whole.
 
By examining the directory structure, we know where is localized the data related to each entry. We don't depend any more on a binary structure that could become corrupted and unusable as a whole.
  
=== Metadata is stored as a single file for each entry ===
+
=== Metadata is stored in a single file per property ===
  
Each entry has its metadata stored in a single file, so that if corruption happened on one of those, the rest of the entries would be unaffected. The format in which metadata is stored even allows to recover from a malformed property by just dropping it.
+
Metadata for each entry is stored in several files, one per property. In this way, if corruption happened on one those properties, the rest of the entry (and the other entries in the DS) would be unaffected.
 +
: See [[olpc:Low-level_Activity_API#Meta_Data]].
  
 
=== Queries are accelerated with a disposable database ===
 
=== Queries are accelerated with a disposable database ===
Line 55: Line 63:
 
  1a
 
  1a
 
       1ab88287-766a-4d98-a7c0-4233dc48647a
 
       1ab88287-766a-4d98-a7c0-4233dc48647a
             1ab88287-766a-4d98-a7c0-4233dc48647a
+
             data
 
             metadata
 
             metadata
 +
                  uid
 +
                  checksum
 +
                  activity_id
 +
                  mime_type
 +
                  preview
 +
                  share-scope
 +
                  timestamp
 +
                  title
 
  2b
 
  2b
 
       2b90597c-0912-4e7f-8eeb-71a0f004490d
 
       2b90597c-0912-4e7f-8eeb-71a0f004490d
             2b90597c-0912-4e7f-8eeb-71a0f004490d
+
             data
             checksum ~> checksums/464493d8d929436b6152e868867ed451
+
             metadata
            extra_metadata
+
                  uid
 +
                  checksum
 +
                  activity_id
 +
                  mime_type
 
                   preview
 
                   preview
            metadata
+
                  share-scope
 +
                  timestamp
 +
                  title
 
  3c
 
  3c
 
       3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a
 
       3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a
             3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a -> 2b/2b90597c-0912-4e7f-8eeb-71a0f004490d/2b90597c-0912-4e7f-8eeb-71a0f004490d
+
             data -> 2b/2b90597c-0912-4e7f-8eeb-71a0f004490d/data
             checksum ~> checksums/464493d8d929436b6152e868867ed451
+
             metadata
            extra_metadata
+
                  uid
 +
                  checksum
 +
                  activity_id
 +
                  mime_type
 
                   preview
 
                   preview
            metadata
+
                  share-scope
 +
                  timestamp
 +
                  title
 
  4d
 
  4d
 
       4db11d29-2f07-4452-bd8e-22a6a483ac19
 
       4db11d29-2f07-4452-bd8e-22a6a483ac19
             4db11d29-2f07-4452-bd8e-22a6a483ac19
+
             data
 
             metadata
 
             metadata
            extra_metadata
+
                  uid
 +
                  checksum
 +
                  activity_id
 +
                  mime_type
 
                   preview
 
                   preview
 +
                  share-scope
 +
                  timestamp
 +
                  title
 
       4d9f2027-b41e-4015-a848-6b3972193eb8
 
       4d9f2027-b41e-4015-a848-6b3972193eb8
             4d9f2027-b41e-4015-a848-6b3972193eb8
+
             data
 
             metadata
 
             metadata
            extra_metadata
+
                  uid
 +
                  checksum
 +
                  activity_id
 +
                  mime_type
 
                   preview
 
                   preview
 +
                  share-scope
 +
                  timestamp
 +
                  title
 
  checksums
 
  checksums
 
       464493d8d929436b6152e868867ed451
 
       464493d8d929436b6152e868867ed451
             2b90597c-0912-4e7f-8eeb-71a0f004490d ~> 2b90597c-0912-4e7f-8eeb-71a0f004490d/2b90597c-0912-4e7f-8eeb-71a0f004490d
+
             2b90597c-0912-4e7f-8eeb-71a0f004490d
             3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a ~> 3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a/3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a
+
             3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a
 
  index
 
  index
 
       flintlock
 
       flintlock
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       value.baseB
 
       value.baseB
 
       value.DB
 
       value.DB
 +
index_updated
 +
version
  
 
'''1a''': directory holding entries, it's only function is to avoid having too many directories in a single directory, as this is considered specially harmful on jffs2.
 
'''1a''': directory holding entries, it's only function is to avoid having too many directories in a single directory, as this is considered specially harmful on jffs2.
Line 106: Line 146:
 
'''1a/1ab88287-...-4233dc48647a''': directory holding the files related to one entry
 
'''1a/1ab88287-...-4233dc48647a''': directory holding the files related to one entry
  
'''1a/1ab88287-...-4233dc48647a/1ab88287-...-4233dc48647a''': "data" file related to an entry
+
'''1a/1ab88287-...-4233dc48647a/data''': file related to an entry
  
'''1a/1ab88287-...-4233dc48647a/metadata''': file containing the metadata properties of an entry
+
'''1a/1ab88287-...-4233dc48647a/metadata''': directory containing a file for each metadata property of an entry
  
'''2b/2b90597c-...-71a0f004490d/extra_metadata''': directory containing those metadata properties not contained in '''metadata''' for being either binary data or too big
+
'''2b/2b90597c-...-71a0f004490d/metadata/activity_id''': file containing the value of the '''activity_id''' property
  
'''2b/2b90597c-...-71a0f004490d/extra_metadata/preview''': file containing the value of the '''preview''' property
+
'''3c/3cdf5f0e-...-cbedfcfe1c4a/data''': hard link to the same file in the entry '''2b90597c-...-71a0f004490d'''
  
'''3c/3cdf5f0e-...-cbedfcfe1c4a/3cdf5f0e-...-cbedfcfe1c4a''': hard link to the same file in the entry '''2b90597c-...-71a0f004490d'''
+
'''checksums''': directory containing a directory per each file contained in the DS, named by its md5 checksum
  
'''3c/3cdf5f0e-...-cbedfcfe1c4a/checksum ~> checksums/464493d8d929436b6152e868867ed451''': symbolic link to the file in '''checksums'''. Used to get the checksum of the entry without having to recalculate it nor read it from the metadata file
+
'''checksums/464493d8d929436b6152e868867ed451''': directory containing files named by each entry that contain a file with this checksum
  
'''checksums''': directory containing a directory per each file contained in the DS, named by its md5 checksum
+
'''checksums/464493d8d929436b6152e868867ed451/2b90597c-...-71a0f004490d''' file named by the uid of an entry the file of which has this checksum.
  
'''checksums/464493d8d929436b6152e868867ed451''': directory containing links to all the entries that contain a file with this checksum
+
'''index''': directory containing all files that belong to the search database. Can be deleted and recreated from the rest of the DS if needed without incurring in data loss.
  
'''checksums/464493d8d929436b6152e868867ed451/2b90597c-...-71a0f004490d''' symbolic link to a file in an entry with this checksum.
+
'''index_updated''': When this file is not present, is because the xapian index is being rebuilt because it cannot be opened. Queries should fall back to display all the files on disk until the index is rebuilt.
  
'''index''': directory containing all files that belong to the search database. Can be deleted and recreated from the rest of the DS if needed without incurring in data loss.
+
'''version''': file that contains the version of the file layout. Currently we are at 1. Is updated when an earlier version is migrated to a newer one.
  
 
== Source code ==
 
== Source code ==
  
http://dev.laptop.org/git?p=users/tomeu/datastore;a=summary
+
http://git.sugarlabs.org/projects/sugar-datastore

Latest revision as of 20:33, 23 February 2010

Introduction

This page describes the design of a new DataStore implementation that was shipped first in the 0.84 (April 2009) Sugar release.

Goals

Reliability

A good DataStore doesn't lose data easily.

Performance

Queries should be fast enough for the journal to be very responsive when browsing its contents.

Activities should be able to store their data quickly and present a fast UI to their users.

The shell should be able to quickly query the DS to allow the user to resume entries from other views than the journal.

Maintainability

The original implementation tried to achieve goals that were hard and that proved not to be necessary at this stage. This has caused the code base to be unnecessarily complex and several changes to the requirements added considerable confusion to it. We wish to focus the code on what is really needed and do it well.

Custom metadata properties

Activities should be able to store in their entries the metadata they wish, should not be limited to a predefined set.

More efficient file storage

Identical files should be stored just once.

Versioned entries (not fulfilled yet)

Entries may be related in version trees.

Design

Filesystem knows which entries are stored

By examining the directory structure, we know where is localized the data related to each entry. We don't depend any more on a binary structure that could become corrupted and unusable as a whole.

Metadata is stored in a single file per property

Metadata for each entry is stored in several files, one per property. In this way, if corruption happened on one those properties, the rest of the entry (and the other entries in the DS) would be unaffected.

See olpc:Low-level_Activity_API#Meta_Data.

Queries are accelerated with a disposable database

This allows us to efficiently query the stored entries, but as we only use the database to accelerate queries, we can drop and recreate it in case of corruption or update to an incompatible database format.

Detect identical files and hard-link them

This improves storage efficiency in general, but in our case is more important because we wish to record in the journal several interactions that refer to the same file. For example, "Downloaded lesson3.pdf", "Read lesson3.pdf", "Sent lesson3.pdf to Juan" would all refer to the same file and we need to only store it once.

Layout on disk

The proposed implementation relies heavily on the data structures provided by the filesystem, thus the layout in which files are disposed on disk is a fundamental part of its design.

Example of a datastore containing 5 entries, two of them referring to the same file (with checksum 464493d8d929436b6152e868867ed451):

1a
      1ab88287-766a-4d98-a7c0-4233dc48647a
            data
            metadata
                  uid
                  checksum
                  activity_id
                  mime_type
                  preview
                  share-scope
                  timestamp
                  title
2b
      2b90597c-0912-4e7f-8eeb-71a0f004490d
            data
            metadata
                  uid
                  checksum
                  activity_id
                  mime_type
                  preview
                  share-scope
                  timestamp
                  title
3c
      3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a
            data -> 2b/2b90597c-0912-4e7f-8eeb-71a0f004490d/data
            metadata
                  uid
                  checksum
                  activity_id
                  mime_type
                  preview
                  share-scope
                  timestamp
                  title
4d
      4db11d29-2f07-4452-bd8e-22a6a483ac19
            data
            metadata
                  uid
                  checksum
                  activity_id
                  mime_type
                  preview
                  share-scope
                  timestamp
                  title
      4d9f2027-b41e-4015-a848-6b3972193eb8
            data
            metadata
                  uid
                  checksum
                  activity_id
                  mime_type
                  preview
                  share-scope
                  timestamp
                  title
checksums
      464493d8d929436b6152e868867ed451
            2b90597c-0912-4e7f-8eeb-71a0f004490d
            3cdf5f0e-7595-4166-b1f9-cbedfcfe1c4a
index
      flintlock
      iamflint
      postlist.baseA
      postlist.baseB
      postlist.DB
      record.baseA
      record.baseB
      record.DB
      termlist.baseA
      termlist.baseB
      termlist.DB
      value.baseA
      value.baseB
      value.DB
index_updated
version

1a: directory holding entries, it's only function is to avoid having too many directories in a single directory, as this is considered specially harmful on jffs2.

1a/1ab88287-...-4233dc48647a: directory holding the files related to one entry

1a/1ab88287-...-4233dc48647a/data: file related to an entry

1a/1ab88287-...-4233dc48647a/metadata: directory containing a file for each metadata property of an entry

2b/2b90597c-...-71a0f004490d/metadata/activity_id: file containing the value of the activity_id property

3c/3cdf5f0e-...-cbedfcfe1c4a/data: hard link to the same file in the entry 2b90597c-...-71a0f004490d

checksums: directory containing a directory per each file contained in the DS, named by its md5 checksum

checksums/464493d8d929436b6152e868867ed451: directory containing files named by each entry that contain a file with this checksum

checksums/464493d8d929436b6152e868867ed451/2b90597c-...-71a0f004490d file named by the uid of an entry the file of which has this checksum.

index: directory containing all files that belong to the search database. Can be deleted and recreated from the rest of the DS if needed without incurring in data loss.

index_updated: When this file is not present, is because the xapian index is being rebuilt because it cannot be opened. Queries should fall back to display all the files on disk until the index is rebuilt.

version: file that contains the version of the file layout. Currently we are at 1. Is updated when an earlier version is migrated to a newer one.

Source code

http://git.sugarlabs.org/projects/sugar-datastore